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Malaria Cell Atlas

P. falciparum 10x set3

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Chromium 10x cell view (): PCA UMAP

Prinicipal Component Analysis view of single-cell transcriptomes from across intraerythrocytic asexual and sexual stages of the parasite, based on highly variable genes

UMAP visualisation of single-cell transcriptomes from across intraerythrocytic asexual and sexual stages of the parasite (including lncRNAs)

Chromium 10x gene view:

k-nearest neighbors (kNN) force-directed graph of highly variable features(including lncRNAs)

Chromium 10x cell view (): PCA UMAP

Prinicipal Component Analysis view of single-cell transcriptomes from across intraerythrocytic asexual and sexual stages of the parasite, based on highly variable genes

UMAP visualisation of single-cell transcriptomes from across intraerythrocytic asexual and sexual stages of the parasite

Chromium 10x gene view:

k-nearest neighbors (kNN) force-directed graph of highly variable features across cell types

Extra cell view (): PCA UMAP

Extra gene view: